Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015826341.1_cds_XP_016502631.1_16250
CDS Infomation

[gene=LOC107820802] [db_xref=GeneID:107820802] [protein=IRK-interacting protein-like isoform X2] [protein_id=XP_016502631.1] [location=join(146..214,470..746,831..1849)] [gbkey=CDS]
Sequence

ATGGCTAATTCTTCTTCTTCTTCCTCAAAATCCTCCATTTCTCCACGTCATCCCCCTCTT
TTTACTCCTATAGAAGAAGGGAATGAAGAAGAGGAATATTCACAAGGGAGAAGCAGTTTT
AGAGCAGAGACAACACCAAGTGAAGTTGAATACAGACACCGTCCAACACCTTTACATCAA
CATTCTAATACAGAGAATAAAGGCAAAGGGTGTACAAAAAAGAGGCCAGAAAATGGAGAA
GATGACAGAGGAGTTTTATGCAACAAATGCAGACCAAGTAACAGAGAGAGAATTACTCAT
GTAGTTCCTTTAGATAACAAGAGTACTTCTATATCGAGTCCACATGGGTCAAGAGAAGAA
CAATGGAAAGTAGCAGTGGCTGAACTTTCACATAAGTTAATTCAAGCTACAAGAAAAAGA
GATGAGGCTATTTTAGAAGCATCAAGATTGAAGTTTTCTATGGTTGAGCTTGAAAAAAAG
CTAAACAAGCTTGAAATTTATTGTCACAGTTTGAAATCTGGGCTTGAAGTTTGTAGCAAC
AATGTTAATTCTCAGCACCAAATTACCAGATCCCCTCATCTCCAACGTGTTAAATTTGGT
GAAGAGGATAAAGTAATTGAACATTTCTTGGTTATGGTTTCTGAGGCAAGGTCTTCTGTT
AGGAATTTAAGTCGATCAATGACACTTCAGCTAAGACAAATTGGTGGTAAAGTTTATGAT
CGAATTGCATTACTTCTTCAACCATATGATATTAAGATCTCAATTTCAAGAAATCCGAGA
GGGTTAATTGTGTATCTTGAAGCTTTATTAAACAAAGCTTTTTATGAGGATTTTGAGTCA
AATGGATTTCAAAAGGGGTCTTGTAATCAAATCTTGAACCCCATTGACCGTTGTGAAGCA
AATTTTGGTTTGTACAGCCGTTTGAAGGATTTAACATGGGAAGAAGTTTTGAGTAAAGGG
ACAAGATTTTACAGTGAAGAATTCAGTAAGTTTTGTGATAGGAAAATGAGTGAAATTGTG
GCTATGTTGGGTTGGAACCGTGCTTGGCCTGAACCACTTTTGCAAGCTTTTTTTGGTGCA
TCAAAAGCAGTATGGTTAGTGCACTTATTGGCTAATTCACTGCACCCTGGACTGCCTATT
TTCAGAGTGGATAAAGAAATGAAATTTGACTCAGTTTATATGGAAGATATGGGTGGAGAT
AAAGCTAAGAAGTTGGTTCCAGCCATGGTTCGAATCACGGTCACACCTGGGTTCTATGTC
TATGACAATGTGGTCAAGTGCAAGGTGCTTAGCAGGTACAATAATAGTATTAACAATATT
TCATTTGATGGTAATGAAAAGGGTTTAACCCCATCACCTACATAA

Peptide Sequence

PEP ID

XP_016502631.1
PEP Infomation

PREDICTED: IRK-interacting protein-like isoform X2 [Nicotiana tabacum]
Sequence

MANSSSSSSKSSISPRHPPLFTPIEEGNEEEEYSQGRSSFRAETTPSEVEYRHRPTPLHQ
HSNTENKGKGCTKKRPENGEDDRGVLCNKCRPSNRERITHVVPLDNKSTSISSPHGSREE
QWKVAVAELSHKLIQATRKRDEAILEASRLKFSMVELEKKLNKLEIYCHSLKSGLEVCSN
NVNSQHQITRSPHLQRVKFGEEDKVIEHFLVMVSEARSSVRNLSRSMTLQLRQIGGKVYD
RIALLLQPYDIKISISRNPRGLIVYLEALLNKAFYEDFESNGFQKGSCNQILNPIDRCEA
NFGLYSRLKDLTWEEVLSKGTRFYSEEFSKFCDRKMSEIVAMLGWNRAWPEPLLQAFFGA
SKAVWLVHLLANSLHPGLPIFRVDKEMKFDSVYMEDMGGDKAKKLVPAMVRITVTPGFYV
YDNVVKCKVLSRYNNSINNISFDGNEKGLTPSPT

Transcript Sequence

Gene sequence data has not been registered.